MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4030_ses-1_run-03_T1w.
  • Date and time: 2022-12-06, 16:21.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.8653908145862393
cnr1.6140814286782257
efc0.5589906569957601
fber1474.3854597107436
fwhmavg3.79264
fwhmx3.62304
fwhmy4.3052
fwhmz3.44968
icvscsf0.18598204610108085
icvsgm0.4203093290041913
icvswm0.39370862489472785
inumed2.0240273475646973
inurange0.9170178413391108
qi10.0
qi20.004079080867254461
rpvecsf28.542417540818665
rpvegm13.35585472930529
rpvewm16.489761519910797
sizex176
sizey256
sizez256
snrcsf2.4835089100144927
snrgm8.491555401669292
snrtotal9.084820349038656
snrwm16.279396735432186
snrdcsf27.180700264814032
snrdgm59.44305240355915
snrdtotal53.18631967762081
snrdwm72.93520636448923
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk2.4538284698492197
summarybgmad8.982443906676524
summarybgmean18.24267967917753
summarybgmedian14.877146251499653
summarybgn2311378.0
summarybgp052.9619657695293427
summarybgp9541.53483817726374
summarybgstdv12.267011680218276
summarycsfk35.514771070142906
summarycsfmad113.87742775019903
summarycsfmean403.94005039043367
summarycsfmedian372.66914772987366
summarycsfn22672.0
summarycsfp05235.1093988265842
summarycsfp95652.7398405898364
summarycsfstdv150.05419446146462
summarygmk-0.2449413657686179
summarygmmad100.40376189018426
summarygmmean822.1512245390804
summarygmmedian815.0118084475398
summarygmn16779.0
summarygmp05677.751621991396
summarygmp95989.8418379940091
summarygmstdv95.97623555082797
summarywmk0.24455476992981406
summarywmmad59.683349513250675
summarywmmean1002.1175903092163
summarywmmedian1000.0000342354178
summarywmn219457.0
summarywmp05904.32853987962
summarywmp951106.0922627076507
summarywmstdv61.42719979946112
tpmoverlapcsf0.1690399944782257
tpmoverlapgm0.44855785369873047
tpmoverlapwm0.5019912123680115
wm2max0.5142807685649992
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime17:22:39.237500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoNumber3
EchoTime0.00541
FlipAngle7
ImageOrientationPatientDICOM[0.0488089, 0.95013, 0.308011, 0.0074964, 0.308022, -0.95135]
ImageOrientationTextSag>Cor(2.8)>Tra(0.5)
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0329976
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2
SeriesNumber18
ShimSetting[2640, 5455, -7472, 337, -52, -932, 44, -152]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp232.23
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumee03dc754b820a570bdbe3005b65381c
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.